- Jeffrey J. Weinschenk, William E. Combs, Robert J. Marks II, "On the avoidance of rule explosion in fuzzy inference engines, " International Journal of Information Technology and Intelligent Computing, vol.1, #4 (2007).
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- Russell W. Duren, Robert J. Marks II, Paul D. Reynolds and Matthew L. Trumbo, "Real-Time Neural Network Inversion on the SRC-6e Reconfigurable Computer," IEEE Transactions on Neural Networks, vol. 18, no. 3, May 2007 pp. 889-901.
- William F. Basener, Topology and Its Applications, Wiley-Interscience (2006).
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William E. Combs, Jeffrey J. Weinschenk, Robert J. Marks II, " Genomic Systems Design: A novel, biologically-based framework for enhancing the adaptive, autonomous capabilities of computer systems", FUZZ-IEEE 2004, IEEE International Conference on Fuzzy Systems, 25-29 July, 2004, Budapest
- E. Trice and G. Dodgen, "The 7-Piece Perfect Play Lookup Database for the Game of Checkers", ICGA Journal Vol. 26, No. 4 - December 2003, pp. 229-238.
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- R.J. Streifel, R.J. Marks II, R. Reed. J.J. Choi and M. Healy, "Dynamic Fuzzy Control of Genetic Algorithm Parameter Coding", IEEE Transactions on Systems, Man and Cybernetics, Part B: Cybernetics (Vol. 29, No. 3, June 1999, pp.426-32).
- P.S. Cho, H.G. Kuterdem and R.J. Marks II, "A spherical dose model for radiosurgery plan optimization", Phys. Med. Biol, vol.43, pp.3145-3148 (1998).
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- C. Ramon, P. Czapski, R.J. Marks II, H.C. Lai and S. Lee, "Noninvasive Biomagnetic Sensing of Biological Currents", National Acadamies of Science and Engineering National Research Council of the United States, Radio Science Meeting, June 19-24, 1994, Seattle, p. 272.
- Granville Sewell, Analysis of a Finite Element Method: Pde/Protran, Springer-Verlag (1985) [Postscript]
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